BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004E11SP1|AL425268
(967 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1618 1861 0.0
>3x_Contig1618
Length = 12146
Score = 1861 bits (936), Expect = 0.0
Identities = 956/962 (99%), Gaps = 2/962 (0%)
Strand = Plus / Plus
Query: 1 tctcggaaccaatatacgttagaagatcgagggcttcaggcgaaa-ctctacttcctctt 59
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 6209 tctcggaaccaatattcgttagaagatcgagggcttcaggcgaaagctctacttcctctt 6268
Query: 60 ctgtacttctgatagttaagattgtcttgatttcacttgcatcgtaattcttggtagtta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6269 ctgtacttctgatagttaagattgtcttgatttcacttgcatcgtaattcttggtagtta 6328
Query: 120 ttatgatagayctatccaaaaggtcaagaggaagtccatgtggggatttgtagttggtac 179
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6329 ttatgatagatctatccaaaaggtcaagaggaagtccatgtggggatttgtagttggtac 6388
Query: 180 cacgggtcttagaaataccacggttagttgccattatcacgattggtgcaaactcatctt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6389 cacgggtcttagaaataccacggttagttgccattatcacgattggtgcaaactcatctt 6448
Query: 240 ctaaagcacggttaatgaaagamaaacattcaatatctagcatgtgaacttcatcgatga 299
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 6449 ctaaagcacggttaatgaaagacaaacattcaatatctagcatgtgaacttcatcgatga 6508
Query: 300 agagaacacctggaacaatttctgctttaccttcttctttccattctgcgactttcgtat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6509 agagaacacctggaacaatttctgctttaccttcttctttccattctgcgactttcgtat 6568
Query: 360 taatttggtcacgaacttcggatctgatttcacctgtgtcaccggtaaacaaagccaaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6569 taatttggtcacgaacttcggatctgatttcacctgtgtcaccggtaaacaaagccaaga 6628
Query: 420 aaccttgtgtacgagagtttatcacatcaatttcatgcaatgaaacagtgtgaactacag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6629 aaccttgtgtacgagagtttatcacatcaatttcatgcaatgaaacagtgtgaactacag 6688
Query: 480 tctttcttttttgaagttcaccctcagggcactgtacaaactttgtgtcggcacccatgg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6689 tctttcttttttgaagttcaccctcagggcactgtacaaactttgtgtcggcacccatgg 6748
Query: 540 catcgtaatcacgagaacgggcgaaggacctacctagtttggtgatcttgccactggcct 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6749 catcgtaatcacgagaacgggcgaaggacctacctagtttggtgatcttgccactggcct 6808
Query: 600 tatctatagagataacatcaccagcaagaaccttttctttagttagaccttcaatcatct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6809 tatctatagagataacatcaccagcaagaaccttttctttagttagaccttcaatcatct 6868
Query: 660 tattacccaactcataaatagtttccatgtctgtggttttaatggtcaatttaccttgtt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6869 tattacccaactcataaatagtttccatgtctgtggttttaatggtcaatttaccttgtt 6928
Query: 720 tatggccaccagtgattgatctatcgatctggatttccacaacctcaccttcaatcaatt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6929 tatggccaccagtgattgatctatcgatctggatttccacaacctcaccttcaatcaatt 6988
Query: 780 cggtttcttccttaatcttgataccaattgatttacggaaagcttgagttaaagcttcgg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6989 cggtttcttccttaatcttgataccaattgatttacggaaagcttgagttaaagcttcgg 7048
Query: 840 ttttagatagttccaaagaaaagatttcag-amcagcaatggcagtgaatggaacgtctt 898
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 7049 ttttagatagttccaaagaaaagatttcagaaccagcaatggcagtgaatggaacgtctt 7108
Query: 899 tacccaatgattgagataaacccatggccaacgcagttttaccggtggaaggtgggccag 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7109 tacccaatgattgagataaacccatggccaacgcagttttaccggtggaaggtgggccag 7168
Query: 959 ca 960
||
Sbjct: 7169 ca 7170
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7119
Number of Sequences: 1807
Number of extensions: 7119
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)